HL_7ABZ_052

3D structure

PDB id

7ABZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.21 Å

Loop

Sequence

UUGAAA

Length

6 nucleotides

Bulged bases

7ABZ|1|1|G|2168

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ABZ_052 not in the Motif Atlas

Geometric match to HL_1GID_008

Geometric discrepancy: 0.3676

The information below is about HL_1GID_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50621.1

Basepair signature

cWW-F

Number of instances in this motif group

2

Unit IDs

7ABZ|1|1|U|2166
7ABZ|1|1|U|2167
7ABZ|1|1|G|2168
7ABZ|1|1|A|2169
7ABZ|1|1|A|2170
7ABZ|1|1|A|2171

Current chains

Chain 1

23S ribosomal RNA

Nearby chains