HL_7ABZ_110
3D structure
- PDB id
- 7ABZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.21 Å
Loop
- Sequence
- CAGUCGGUAG
- Length
- 10 nucleotides
- Bulged bases
- 7ABZ|1|7|U|16, 7ABZ|1|7|G|19, 7ABZ|1|7|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ABZ_110 not in the Motif Atlas
- Homologous match to HL_3KFU_004
- Geometric discrepancy: 0.2948
- The information below is about HL_3KFU_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ABZ|1|7|C|13
7ABZ|1|7|A|14
7ABZ|1|7|G|15
7ABZ|1|7|U|16
7ABZ|1|7|C|17
7ABZ|1|7|G|18
7ABZ|1|7|G|19
7ABZ|1|7|U|20
7ABZ|1|7|A|21
7ABZ|1|7|G|22
Current chains
- Chain 7
- tRNA-Phe
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain E
- 50S ribosomal protein L5
Coloring options: