HL_7ABZ_121
3D structure
- PDB id
- 7ABZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.21 Å
Loop
- Sequence
- GG(5MU)(PSU)CAAC(PSU)CC
- Length
- 11 nucleotides
- Bulged bases
- 7ABZ|1|4|G|340, 7ABZ|1|4|C|343, 7ABZ|1|4|C|346, 7ABZ|1|4|PSU|347
- QA status
- Modified nucleotides: 5MU, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ABZ|1|4|G|339
7ABZ|1|4|G|340
7ABZ|1|4|5MU|341
7ABZ|1|4|PSU|342
7ABZ|1|4|C|343
7ABZ|1|4|A|344
7ABZ|1|4|A|345
7ABZ|1|4|C|346
7ABZ|1|4|PSU|347
7ABZ|1|4|C|348
7ABZ|1|4|C|349
Current chains
- Chain 4
- transfer-messenger RNA (tmRNA)
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 5
- SsrA-binding protein
- Chain 6
- Elongation factor Tu 2
- Chain F
- 50S ribosomal protein L6
Coloring options: