HL_7AC7_030

3D structure

PDB id

7AC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of accomodated trans-translation complex on E. Coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

UGUGAG

Length

6 nucleotides

Bulged bases

7AC7|1|1|A|1226

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AC7_030 not in the Motif Atlas

Homologous match to HL_5J7L_164

Geometric discrepancy: 0.2081

The information below is about HL_5J7L_164

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7AC7|1|1|U|1222
7AC7|1|1|G|1223
7AC7|1|1|U|1224
7AC7|1|1|G|1225
7AC7|1|1|A|1226
7AC7|1|1|G|1227

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain Q

50S ribosomal protein L20

Chain R

50S ribosomal protein L21