HL_7AC7_031

3D structure

PDB id

7AC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of accomodated trans-translation complex on E. Coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

GUGAAAAGC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AC7_031 not in the Motif Atlas

Homologous match to HL_7RQB_033

Geometric discrepancy: 0.172

The information below is about HL_7RQB_033

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41998.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

69

Unit IDs

7AC7|1|1|G|1281
7AC7|1|1|U|1282
7AC7|1|1|G|1283
7AC7|1|1|A|1284
7AC7|1|1|A|1285
7AC7|1|1|A|1286
7AC7|1|1|A|1287
7AC7|1|1|G|1288
7AC7|1|1|C|1289

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain N

50S ribosomal protein L17

Chain S

50S ribosomal protein L22