HL_7AC7_039

3D structure

PDB id

7AC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of accomodated trans-translation complex on E. Coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

CGACAC(6MZ)G

Length

8 nucleotides

Bulged bases

7AC7|1|1|A|1614, 7AC7|1|1|A|1616

QA status

Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AC7_039 not in the Motif Atlas

Homologous match to HL_9DFE_038

Geometric discrepancy: 0.1264

The information below is about HL_9DFE_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89567.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

8

Unit IDs

7AC7|1|1|C|1612
7AC7|1|1|G|1613
7AC7|1|1|A|1614
7AC7|1|1|C|1615
7AC7|1|1|A|1616
7AC7|1|1|C|1617
7AC7|1|1|6MZ|1618
7AC7|1|1|G|1619

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain S

50S ribosomal protein L22

Chain d

50S ribosomal protein L34