HL_7AC7_042

3D structure

PDB id

7AC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of accomodated trans-translation complex on E. Coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

CCUCGCGG

Length

8 nucleotides

Bulged bases

7AC7|1|1|U|1729, 7AC7|1|1|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AC7_042 not in the Motif Atlas

Geometric match to HL_8C3A_054

Geometric discrepancy: 0.2776

The information below is about HL_8C3A_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7AC7|1|1|C|1727
7AC7|1|1|C|1728
7AC7|1|1|U|1729
7AC7|1|1|C|1730
7AC7|1|1|G|1731
7AC7|1|1|C|1732
7AC7|1|1|G|1733
7AC7|1|1|G|1734

Current chains

Chain 1

23S ribosomal RNA

Nearby chains