HL_7AC7_050

3D structure

PDB id

7AC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of accomodated trans-translation complex on E. Coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

GUGGACGCCAGUCUGC

Length

16 nucleotides

Bulged bases

7AC7|1|1|C|2145, 7AC7|1|1|C|2146

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AC7_050 not in the Motif Atlas

Homologous match to HL_5J7L_184

Geometric discrepancy: 0.558

The information below is about HL_5J7L_184

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79299.1

Basepair signature

cWW-tSW-R

Number of instances in this motif group

44

Unit IDs

7AC7|1|1|G|2138
7AC7|1|1|U|2139
7AC7|1|1|G|2140
7AC7|1|1|G|2141
7AC7|1|1|A|2142
7AC7|1|1|C|2143
7AC7|1|1|G|2144
7AC7|1|1|C|2145
7AC7|1|1|C|2146
7AC7|1|1|A|2147
7AC7|1|1|G|2148
7AC7|1|1|U|2149
7AC7|1|1|C|2150
7AC7|1|1|U|2151
7AC7|1|1|G|2152
7AC7|1|1|C|2153

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain p

30S ribosomal protein S11