HL_7AC7_086

3D structure

PDB id

7AC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of accomodated trans-translation complex on E. Coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

7AC7|1|2|U|842

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AC7_086 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.2983

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7AC7|1|2|C|840
7AC7|1|2|C|841
7AC7|1|2|U|842
7AC7|1|2|U|843
7AC7|1|2|G|844
7AC7|1|2|A|845
7AC7|1|2|G|846

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain w

30S ribosomal protein S18