HL_7AC7_106

3D structure

PDB id

7AC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of accomodated trans-translation complex on E. Coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

CUCCGCUCUUAG

Length

12 nucleotides

Bulged bases

7AC7|1|4|U|158, 7AC7|1|4|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AC7_106 not in the Motif Atlas

Geometric match to HL_8C3A_054

Geometric discrepancy: 0.1975

The information below is about HL_8C3A_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7AC7|1|4|C|152
7AC7|1|4|U|153
7AC7|1|4|C|154
7AC7|1|4|C|155
7AC7|1|4|G|156
7AC7|1|4|C|157
7AC7|1|4|U|158
7AC7|1|4|C|159
7AC7|1|4|U|160
7AC7|1|4|U|161
7AC7|1|4|A|162
7AC7|1|4|G|163

Current chains

Chain 4

transfer-messenger RNA (tmRNA)

Nearby chains