HL_7ACJ_025
3D structure
- PDB id
- 7ACJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of translocated trans-translation complex on E. coli stalled ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGGGUCAACCCGACUUAC
- Length
- 18 nucleotides
- Bulged bases
- 7ACJ|1|1|G|882, 7ACJ|1|1|C|888, 7ACJ|1|1|A|896
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ACJ_025 not in the Motif Atlas
- Geometric match to HL_5ID6_001
- Geometric discrepancy: 0.2155
- The information below is about HL_5ID6_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 7
Unit IDs
7ACJ|1|1|G|880
7ACJ|1|1|G|881
7ACJ|1|1|G|882
7ACJ|1|1|G|883
7ACJ|1|1|U|884
7ACJ|1|1|C|885
7ACJ|1|1|A|886
7ACJ|1|1|A|887
7ACJ|1|1|C|888
7ACJ|1|1|C|889
7ACJ|1|1|C|890
7ACJ|1|1|G|891
7ACJ|1|1|A|892
7ACJ|1|1|C|893
7ACJ|1|1|U|894
7ACJ|1|1|U|895
7ACJ|1|1|A|896
7ACJ|1|1|C|897
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 4
- Transfer-messenger RNA; tmRNA
- Chain M
- 50S ribosomal protein L16
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