HL_7ACJ_058

3D structure

PDB id

7ACJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAAUGGAAG

Length

10 nucleotides

Bulged bases

7ACJ|1|1|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ACJ_058 not in the Motif Atlas

Homologous match to HL_7RQB_059

Geometric discrepancy: 0.1272

The information below is about HL_7RQB_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40210.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

12

Unit IDs

7ACJ|1|1|U|2404
7ACJ|1|1|G|2405
7ACJ|1|1|A|2406
7ACJ|1|1|A|2407
7ACJ|1|1|U|2408
7ACJ|1|1|G|2409
7ACJ|1|1|G|2410
7ACJ|1|1|A|2411
7ACJ|1|1|A|2412
7ACJ|1|1|G|2413

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L15