HL_7ACJ_080

3D structure

PDB id

7ACJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7ACJ|1|2|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ACJ_080 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2119

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7ACJ|1|2|G|462
7ACJ|1|2|U|463
7ACJ|1|2|U|464
7ACJ|1|2|A|465
7ACJ|1|2|A|466
7ACJ|1|2|U|467
7ACJ|1|2|A|468
7ACJ|1|2|C|469
7ACJ|1|2|C|470

Current chains

Chain 2

16S ribosomal RNA

Nearby chains