HL_7ACJ_081

3D structure

PDB id

7ACJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCAGCC(G7M)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ACJ_081 not in the Motif Atlas

Homologous match to HL_4LFB_013

Geometric discrepancy: 0.1934

The information below is about HL_4LFB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ACJ|1|2|G|521
7ACJ|1|2|C|522
7ACJ|1|2|A|523
7ACJ|1|2|G|524
7ACJ|1|2|C|525
7ACJ|1|2|C|526
7ACJ|1|2|G7M|527
7ACJ|1|2|C|528

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain 4

Transfer-messenger RNA; tmRNA

Chain q

30S ribosomal protein S12