3D structure

PDB id
7ACJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of translocated trans-translation complex on E. coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
AUGCCAAU
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7ACJ_112 not in the Motif Atlas
Geometric match to HL_2ZZM_002
Geometric discrepancy: 0.3758
The information below is about HL_2ZZM_002
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_13963.3
Basepair signature
cWW-F-F
Number of instances in this motif group
4

Unit IDs

7ACJ|1|1|A|2700
7ACJ|1|1|U|2701
7ACJ|1|1|G|2702
7ACJ|1|1|C|2703
7ACJ|1|1|C|2704
7ACJ|1|1|A|2705
7ACJ|1|1|A|2706
7ACJ|1|1|U|2707

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain N
50S ribosomal protein L17

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.0883 s