3D structure

PDB id
7ACR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of post-translocated trans-translation complex on E. coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.44 Å

Loop

Sequence
CGAAAG
Length
6 nucleotides
Bulged bases
7ACR|1|1|A|1808
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7ACR_046 not in the Motif Atlas
Homologous match to HL_5J7L_179
Geometric discrepancy: 0.1176
The information below is about HL_5J7L_179
Detailed Annotation
GNRA related
Broad Annotation
GNRA related
Motif group
HL_04783.2
Basepair signature
cWW-F-F-F
Number of instances in this motif group
9

Unit IDs

7ACR|1|1|C|1806
7ACR|1|1|G|1807
7ACR|1|1|A|1808
7ACR|1|1|A|1809
7ACR|1|1|A|1810
7ACR|1|1|G|1811

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain B
50S ribosomal protein L2
Chain X
50S ribosomal protein L28

Coloring options:


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