HL_7ACR_077

3D structure

PDB id

7ACR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of post-translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ACR_077 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.1732

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7ACR|1|2|A|320
7ACR|1|2|A|321
7ACR|1|2|C|322
7ACR|1|2|U|323
7ACR|1|2|G|324
7ACR|1|2|A|325
7ACR|1|2|G|326
7ACR|1|2|A|327
7ACR|1|2|C|328
7ACR|1|2|A|329
7ACR|1|2|C|330
7ACR|1|2|G|331
7ACR|1|2|G|332
7ACR|1|2|U|333

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain u

30S ribosomal protein S16

Chain y

30S ribosomal protein S20