HL_7ACR_087

3D structure

PDB id

7ACR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of post-translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

7ACR|1|2|C|841, 7ACR|1|2|U|842, 7ACR|1|2|U|843, 7ACR|1|2|G|844, 7ACR|1|2|A|845

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ACR_087 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3256

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7ACR|1|2|C|840
7ACR|1|2|C|841
7ACR|1|2|U|842
7ACR|1|2|U|843
7ACR|1|2|G|844
7ACR|1|2|A|845
7ACR|1|2|G|846

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain w

30S ribosomal protein S18