3D structure

PDB id
7ACR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of post-translocated trans-translation complex on E. coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.44 Å

Loop

Sequence
GUCGGACAU
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7ACR_112 not in the Motif Atlas
Homologous match to HL_5J7L_219
Geometric discrepancy: 0.4205
The information below is about HL_5J7L_219
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_50860.2
Basepair signature
cWW-F-cWH-F-F-F-F
Number of instances in this motif group
6

Unit IDs

7ACR|1|1|G|2304
7ACR|1|1|U|2305
7ACR|1|1|C|2306
7ACR|1|1|G|2307
7ACR|1|1|G|2308
7ACR|1|1|A|2309
7ACR|1|1|C|2310
7ACR|1|1|A|2311
7ACR|1|1|U|2312

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 4
Transfer-messenger RNA; tmRNA
Chain E
50S ribosomal protein L5

Coloring options:


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