HL_7AF3_003

3D structure

PDB id

7AF3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state M (head domain)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7AF3|1|1|U|1030

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AF3_003 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.2116

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7AF3|1|1|C|1028
7AF3|1|1|U|1029
7AF3|1|1|U|1030
7AF3|1|1|C|1031
7AF3|1|1|G|1032
7AF3|1|1|G|1033

Current chains

Chain 1

16S rRNA (head)

Nearby chains