HL_7AFI_017
3D structure
- PDB id
- 7AFI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacterial 30S ribosomal subunit assembly complex state C (body domain)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.53 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AFI_017 not in the Motif Atlas
- Geometric match to HL_1J1U_002
- Geometric discrepancy: 0.3732
- The information below is about HL_1J1U_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_83632.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
7AFI|1|A|G|786
7AFI|1|A|A|787
7AFI|1|A|U|788
7AFI|1|A|U|789
7AFI|1|A|A|790
7AFI|1|A|G|791
7AFI|1|A|A|792
7AFI|1|A|U|793
7AFI|1|A|A|794
7AFI|1|A|C|795
7AFI|1|A|C|796
Current chains
- Chain A
- 16SrRNA
Nearby chains
- Chain K
- 30S ribosomal protein S11
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