HL_7AFN_003

3D structure

PDB id

7AFN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state B (head domain)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7AFN|1|1|U|1030

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AFN_003 not in the Motif Atlas

Geometric match to HL_3U4M_001

Geometric discrepancy: 0.2375

The information below is about HL_3U4M_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

60

Unit IDs

7AFN|1|1|C|1028
7AFN|1|1|U|1029
7AFN|1|1|U|1030
7AFN|1|1|C|1031
7AFN|1|1|G|1032
7AFN|1|1|G|1033

Current chains

Chain 1

16SrRNA (head domain of the 30S ribosome)

Nearby chains