HL_7AJT_030

3D structure

PDB id

7AJT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S-exosome super-complex (state Pre-A1-exosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

UGAAACUUAAA

Length

11 nucleotides

Bulged bases

7AJT|1|D3|U|1135

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AJT|1|D3|U|1129
7AJT|1|D3|G|1130
7AJT|1|D3|A|1131
7AJT|1|D3|A|1132
7AJT|1|D3|A|1133
7AJT|1|D3|C|1134
7AJT|1|D3|U|1135
7AJT|1|D3|U|1136
7AJT|1|D3|A|1137
7AJT|1|D3|A|1138
7AJT|1|D3|A|1139

Current chains

Chain D3

18S rRNA

Nearby chains

Chain CM

RNA 3'-terminal phosphate cyclase-like protein

Chain JN

Protein FAF1

Chain UL

U3 small nucleolar RNA-associated protein 12