HL_7AJT_043

3D structure

PDB id

7AJT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S-exosome super-complex (state Pre-A1-exosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

UAUUUUGUUGGUUUCUA

Length

17 nucleotides

Bulged bases

7AJT|1|D3|U|830, 7AJT|1|D3|U|833, 7AJT|1|D3|U|836, 7AJT|1|D3|U|839

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AJT|1|D3|U|828
7AJT|1|D3|A|829
7AJT|1|D3|U|830
7AJT|1|D3|U|831
7AJT|1|D3|U|832
7AJT|1|D3|U|833
7AJT|1|D3|G|834
7AJT|1|D3|U|835
7AJT|1|D3|U|836
7AJT|1|D3|G|837
7AJT|1|D3|G|838
7AJT|1|D3|U|839
7AJT|1|D3|U|840
7AJT|1|D3|U|841
7AJT|1|D3|C|842
7AJT|1|D3|U|843
7AJT|1|D3|A|844

Current chains

Chain D3

18S rRNA

Nearby chains

Chain UT

U3 small nucleolar RNA-associated protein 20