HL_7AJU_020
3D structure
- PDB id
- 7AJU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGUAUUG
- Length
- 7 nucleotides
- Bulged bases
- 7AJU|1|D3|U|779
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AJU_020 not in the Motif Atlas
- Homologous match to HL_4V88_204
- Geometric discrepancy: 0.3257
- The information below is about HL_4V88_204
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_48417.1
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 23
Unit IDs
7AJU|1|D3|C|777
7AJU|1|D3|G|778
7AJU|1|D3|U|779
7AJU|1|D3|A|780
7AJU|1|D3|U|781
7AJU|1|D3|U|782
7AJU|1|D3|G|783
Current chains
- Chain D3
- 18S rRNA
Nearby chains
- Chain CH
- Ribosomal RNA-processing protein 9
- Chain DE
- 40S ribosomal protein S4-A
- Chain DY
- 40S ribosomal protein S24-A
- Chain UT
- U3 small nucleolar RNA-associated protein 20
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