HL_7AJU_038

3D structure

PDB id

7AJU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UACAAUGUAAAUACCUUAA

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AJU|1|D3|U|517
7AJU|1|D3|A|518
7AJU|1|D3|C|519
7AJU|1|D3|A|520
7AJU|1|D3|A|521
7AJU|1|D3|U|522
7AJU|1|D3|G|523
7AJU|1|D3|U|524
7AJU|1|D3|A|525
7AJU|1|D3|A|526
7AJU|1|D3|A|527
7AJU|1|D3|U|528
7AJU|1|D3|A|529
7AJU|1|D3|C|530
7AJU|1|D3|C|531
7AJU|1|D3|U|532
7AJU|1|D3|U|533
7AJU|1|D3|A|534
7AJU|1|D3|A|535

Current chains

Chain D3

18S rRNA

Nearby chains

Chain CL

Ribosome biogenesis protein BMS1

Chain DE

40S ribosomal protein S4-A

Chain DJ

40S ribosomal protein S9-A

Chain DY

40S ribosomal protein S24-A