HL_7AJU_039

3D structure

PDB id

7AJU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

AUUGUAAUUAUU

Length

12 nucleotides

Bulged bases

7AJU|1|D3|U|1557

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AJU|1|D3|A|1550
7AJU|1|D3|U|1551
7AJU|1|D3|U|1552
7AJU|1|D3|G|1553
7AJU|1|D3|U|1554
7AJU|1|D3|A|1555
7AJU|1|D3|A|1556
7AJU|1|D3|U|1557
7AJU|1|D3|U|1558
7AJU|1|D3|A|1559
7AJU|1|D3|U|1560
7AJU|1|D3|U|1561

Current chains

Chain D3

18S rRNA

Nearby chains

Chain CK

U3 small nucleolar RNA-associated protein MPP10

Chain CL

Ribosome biogenesis protein BMS1

Chain DS

40S ribosomal protein S18-A

Chain UK

U3 small nucleolar RNA-associated protein 11