HL_7AQD_021

3D structure

PDB id

7AQD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the bacterial RQC complex (Translocating State)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGAAUAG

Length

7 nucleotides

Bulged bases

7AQD|1|A|U|691

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AQD_021 not in the Motif Atlas

Homologous match to HL_7RQB_021

Geometric discrepancy: 0.2142

The information below is about HL_7RQB_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

7AQD|1|A|U|687
7AQD|1|A|G|688
7AQD|1|A|A|689
7AQD|1|A|A|690
7AQD|1|A|U|691
7AQD|1|A|A|692
7AQD|1|A|G|693

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L15

Chain c

50S ribosomal protein L33 1

Chain e

50S ribosomal protein L35