HL_7AQD_073
3D structure
- PDB id
- 7AQD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the bacterial RQC complex (Translocating State)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAGCUGGGAG
- Length
- 10 nucleotides
- Bulged bases
- 7AQD|1|T|C|16, 7AQD|1|T|U|17, 7AQD|1|T|G|18
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AQD_073 not in the Motif Atlas
- Homologous match to HL_4YCO_001
- Geometric discrepancy: 0.2315
- The information below is about HL_4YCO_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_23048.1
- Basepair signature
- cWW-cWS-F-cSH
- Number of instances in this motif group
- 11
Unit IDs
7AQD|1|T|C|13
7AQD|1|T|A|14
7AQD|1|T|G|15
7AQD|1|T|C|16
7AQD|1|T|U|17
7AQD|1|T|G|18
7AQD|1|T|G|19
7AQD|1|T|G|20
7AQD|1|T|A|21
7AQD|1|T|G|22
Current chains
- Chain T
- Ala-tRNA (A/P-site)
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain R
- Rqc2 homolog RqcH
Coloring options: