HL_7AS8_015
3D structure
- PDB id
- 7AS8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUAACAGCC
- Length
- 9 nucleotides
- Bulged bases
- 7AS8|1|A|A|373, 7AS8|1|A|A|374, 7AS8|1|A|C|375
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AS8_015 not in the Motif Atlas
- Homologous match to HL_5J7L_144
- Geometric discrepancy: 0.1038
- The information below is about HL_5J7L_144
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_27670.2
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 13
Unit IDs
7AS8|1|A|G|371
7AS8|1|A|U|372
7AS8|1|A|A|373
7AS8|1|A|A|374
7AS8|1|A|C|375
7AS8|1|A|A|376
7AS8|1|A|G|377
7AS8|1|A|C|378
7AS8|1|A|C|379
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain G
- 50S ribosomal protein L4
- Chain Y
- 50S ribosomal protein L24
Coloring options: