3D structure

PDB id
7AS8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
GGACCAUC
Length
8 nucleotides
Bulged bases
7AS8|1|A|G|458
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7AS8_017 not in the Motif Atlas
Homologous match to HL_4WF9_014
Geometric discrepancy: 0.0955
The information below is about HL_4WF9_014
Detailed Annotation
Pseudoknot geometry
Broad Annotation
No text annotation
Motif group
HL_30680.3
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
15

Unit IDs

7AS8|1|A|G|457
7AS8|1|A|G|458
7AS8|1|A|A|459
7AS8|1|A|C|460
7AS8|1|A|C|461
7AS8|1|A|A|462
7AS8|1|A|U|463
7AS8|1|A|C|464

Current chains

Chain A
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.4535 s
Application loaded.