HL_7AS8_027

3D structure

PDB id

7AS8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGAAAUG

Length

7 nucleotides

Bulged bases

7AS8|1|A|A|828, 7AS8|1|A|U|831

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AS8_027 not in the Motif Atlas

Homologous match to HL_7A0S_023

Geometric discrepancy: 0.1412

The information below is about HL_7A0S_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

7AS8|1|A|U|826
7AS8|1|A|G|827
7AS8|1|A|A|828
7AS8|1|A|A|829
7AS8|1|A|A|830
7AS8|1|A|U|831
7AS8|1|A|G|832

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L2