HL_7AS8_031

3D structure

PDB id

7AS8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

7AS8|1|A|A|1116

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AS8_031 not in the Motif Atlas

Homologous match to HL_6PRV_001

Geometric discrepancy: 0.2258

The information below is about HL_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7AS8|1|A|C|1110
7AS8|1|A|U|1111
7AS8|1|A|U|1112
7AS8|1|A|A|1113
7AS8|1|A|G|1114
7AS8|1|A|A|1115
7AS8|1|A|A|1116
7AS8|1|A|G|1117
7AS8|1|A|C|1118
7AS8|1|A|A|1119
7AS8|1|A|G|1120

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

Rqc2 homolog RqcH

Chain K

50S ribosomal protein L11