HL_7AS8_037

3D structure

PDB id

7AS8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUGAUAUUC

Length

10 nucleotides

Bulged bases

7AS8|1|A|U|1435, 7AS8|1|A|U|1436

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AS8_037 not in the Motif Atlas

Homologous match to HL_4WF9_035

Geometric discrepancy: 0.1565

The information below is about HL_4WF9_035

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7AS8|1|A|G|1428
7AS8|1|A|U|1429
7AS8|1|A|U|1430
7AS8|1|A|G|1431
7AS8|1|A|A|1432
7AS8|1|A|U|1433
7AS8|1|A|A|1434
7AS8|1|A|U|1435
7AS8|1|A|U|1436
7AS8|1|A|C|1437

Current chains

Chain A

23S rRNA

Nearby chains

Chain X

50S ribosomal protein L23