HL_7AS8_050

3D structure

PDB id

7AS8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

7AS8|1|A|U|1984

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AS8_050 not in the Motif Atlas

Homologous match to HL_4WF9_046

Geometric discrepancy: 0.1317

The information below is about HL_4WF9_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

7AS8|1|A|G|1978
7AS8|1|A|G|1979
7AS8|1|A|U|1980
7AS8|1|A|A|1981
7AS8|1|A|A|1982
7AS8|1|A|G|1983
7AS8|1|A|U|1984
7AS8|1|A|U|1985
7AS8|1|A|C|1986

Current chains

Chain A

23S rRNA

Nearby chains

Chain O

50S ribosomal protein L14