HL_7AS8_055

3D structure

PDB id

7AS8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUAAAAGGUAACG

Length

13 nucleotides

Bulged bases

7AS8|1|A|A|2297, 7AS8|1|A|C|2304

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AS8_055 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.0968

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

7AS8|1|A|C|2293
7AS8|1|A|U|2294
7AS8|1|A|A|2295
7AS8|1|A|A|2296
7AS8|1|A|A|2297
7AS8|1|A|A|2298
7AS8|1|A|G|2299
7AS8|1|A|G|2300
7AS8|1|A|U|2301
7AS8|1|A|A|2302
7AS8|1|A|A|2303
7AS8|1|A|C|2304
7AS8|1|A|G|2305

Current chains

Chain A

23S rRNA

Nearby chains

Chain Q

50S ribosomal protein L16

Chain a

50S ribosomal protein L27