3D structure

PDB id
7AS8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
GGCGAC
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7AS8_070 not in the Motif Atlas
Homologous match to HL_5J7L_202
Geometric discrepancy: 0.0912
The information below is about HL_5J7L_202
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.8
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
352

Unit IDs

7AS8|1|A|G|2881
7AS8|1|A|G|2882
7AS8|1|A|C|2883
7AS8|1|A|G|2884
7AS8|1|A|A|2885
7AS8|1|A|C|2886

Current chains

Chain A
23S rRNA

Nearby chains

Chain T
50S ribosomal protein L19

Coloring options:


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