HL_7ASM_025

3D structure

PDB id

7ASM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

7ASM|1|A|U|872, 7ASM|1|A|G|875

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASM_025 not in the Motif Atlas

Homologous match to HL_7RQB_025

Geometric discrepancy: 0.0874

The information below is about HL_7RQB_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53619.1

Basepair signature

cWW-F-F

Number of instances in this motif group

11

Unit IDs

7ASM|1|A|U|871
7ASM|1|A|U|872
7ASM|1|A|U|873
7ASM|1|A|A|874
7ASM|1|A|G|875
7ASM|1|A|G|876

Current chains

Chain A

23S rRNA

Nearby chains

Chain J

50S ribosomal protein L15