HL_7ASN_015

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

CGUUAAUG

Length

8 nucleotides

Bulged bases

7ASN|1|A|U|590, 7ASN|1|A|U|593

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASN_015 not in the Motif Atlas

Homologous match to HL_4WF9_017

Geometric discrepancy: 0.2152

The information below is about HL_4WF9_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50318.1

Basepair signature

cWW-cSH-F-F

Number of instances in this motif group

1

Unit IDs

7ASN|1|A|C|587
7ASN|1|A|G|588
7ASN|1|A|U|589
7ASN|1|A|U|590
7ASN|1|A|A|591
7ASN|1|A|A|592
7ASN|1|A|U|593
7ASN|1|A|G|594

Current chains

Chain A

23S

Nearby chains

Chain H

50S ribosomal protein L13

Chain P

50S ribosomal protein L21