HL_7ASN_038

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

GGGUUAACGCCC

Length

12 nucleotides

Bulged bases

7ASN|1|A|A|1764

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASN_038 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.3308

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

7ASN|1|A|G|1759
7ASN|1|A|G|1760
7ASN|1|A|G|1761
7ASN|1|A|U|1762
7ASN|1|A|U|1763
7ASN|1|A|A|1764
7ASN|1|A|A|1765
7ASN|1|A|C|1766
7ASN|1|A|G|1767
7ASN|1|A|C|1768
7ASN|1|A|C|1769
7ASN|1|A|C|1770

Current chains

Chain A

23S

Nearby chains