HL_7ASN_045

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

GUGAAGAUGC

Length

10 nucleotides

Bulged bases

7ASN|1|A|A|2057, 7ASN|1|A|A|2058, 7ASN|1|A|G|2059

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASN_045 not in the Motif Atlas

Homologous match to HL_4WF9_047

Geometric discrepancy: 0.0857

The information below is about HL_4WF9_047

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_78372.2

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

11

Unit IDs

7ASN|1|A|G|2054
7ASN|1|A|U|2055
7ASN|1|A|G|2056
7ASN|1|A|A|2057
7ASN|1|A|A|2058
7ASN|1|A|G|2059
7ASN|1|A|A|2060
7ASN|1|A|U|2061
7ASN|1|A|G|2062
7ASN|1|A|C|2063

Current chains

Chain A

23S

Nearby chains

Chain D

50S ribosomal protein L3

Chain P

50S ribosomal protein L21

Chain b

50S ribosomal protein L32