HL_7ASN_050

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

GGUUGGAAAUC

Length

11 nucleotides

Bulged bases

7ASN|1|A|U|2332, 7ASN|1|A|G|2335, 7ASN|1|A|A|2336, 7ASN|1|A|A|2337, 7ASN|1|A|A|2338

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASN_050 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.1991

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

7ASN|1|A|G|2330
7ASN|1|A|G|2331
7ASN|1|A|U|2332
7ASN|1|A|U|2333
7ASN|1|A|G|2334
7ASN|1|A|G|2335
7ASN|1|A|A|2336
7ASN|1|A|A|2337
7ASN|1|A|A|2338
7ASN|1|A|U|2339
7ASN|1|A|C|2340

Current chains

Chain A

23S

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA