HL_7ASN_056

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

CUGUAGUCGG

Length

10 nucleotides

Bulged bases

7ASN|1|A|G|2556

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASN_056 not in the Motif Atlas

Geometric match to HL_7RQB_068

Geometric discrepancy: 0.3297

The information below is about HL_7RQB_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.1

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7ASN|1|A|C|2554
7ASN|1|A|U|2555
7ASN|1|A|G|2556
7ASN|1|A|U|2557
7ASN|1|A|A|2558
7ASN|1|A|G|2559
7ASN|1|A|U|2560
7ASN|1|A|C|2561
7ASN|1|A|G|2562
7ASN|1|A|G|2563

Current chains

Chain A

23S

Nearby chains