HL_7ASN_068

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

AGUAAAU

Length

7 nucleotides

Bulged bases

7ASN|1|A|A|658

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASN_068 not in the Motif Atlas

Geometric match to HL_6LAX_002

Geometric discrepancy: 0.3238

The information below is about HL_6LAX_002

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

7ASN|1|A|A|655
7ASN|1|A|G|656
7ASN|1|A|U|657
7ASN|1|A|A|658
7ASN|1|A|A|659
7ASN|1|A|A|660
7ASN|1|A|U|661

Current chains

Chain A

23S

Nearby chains

Chain E

50S ribosomal protein L4