HL_7ASN_076

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

UGUAGUCG

Length

8 nucleotides

Bulged bases

7ASN|1|A|G|2556

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASN_076 not in the Motif Atlas

Homologous match to HL_9DFE_059

Geometric discrepancy: 0.3592

The information below is about HL_9DFE_059

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_46665.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

7ASN|1|A|U|2555
7ASN|1|A|G|2556
7ASN|1|A|U|2557
7ASN|1|A|A|2558
7ASN|1|A|G|2559
7ASN|1|A|U|2560
7ASN|1|A|C|2561
7ASN|1|A|G|2562

Current chains

Chain A

23S

Nearby chains