HL_7ASO_011

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

GGCUCAACC

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASO_011 not in the Motif Atlas

Geometric match to HL_5ID6_001

Geometric discrepancy: 0.2499

The information below is about HL_5ID6_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

7ASO|1|X|G|624
7ASO|1|X|G|625
7ASO|1|X|C|626
7ASO|1|X|U|627
7ASO|1|X|C|628
7ASO|1|X|A|629
7ASO|1|X|A|630
7ASO|1|X|C|631
7ASO|1|X|C|632

Current chains

Chain X

16S

Nearby chains

Chain 7

30S ribosomal protein S16

Chain l

30S ribosomal protein S4