HL_7ASO_022
3D structure
- PDB id
- 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- GUAGUCUGCAACUCGACUAC
- Length
- 20 nucleotides
- Bulged bases
- 7ASO|1|X|G|1327, 7ASO|1|X|C|1328, 7ASO|1|X|A|1329, 7ASO|1|X|C|1333, 7ASO|1|X|G|1334
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ASO_022 not in the Motif Atlas
- Geometric match to HL_4V9F_003
- Geometric discrepancy: 0.3815
- The information below is about HL_4V9F_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.7
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 22
Unit IDs
7ASO|1|X|G|1320
7ASO|1|X|U|1321
7ASO|1|X|A|1322
7ASO|1|X|G|1323
7ASO|1|X|U|1324
7ASO|1|X|C|1325
7ASO|1|X|U|1326
7ASO|1|X|G|1327
7ASO|1|X|C|1328
7ASO|1|X|A|1329
7ASO|1|X|A|1330
7ASO|1|X|C|1331
7ASO|1|X|U|1332
7ASO|1|X|C|1333
7ASO|1|X|G|1334
7ASO|1|X|A|1335
7ASO|1|X|C|1336
7ASO|1|X|U|1337
7ASO|1|X|A|1338
7ASO|1|X|C|1339
Current chains
- Chain X
- 16S
Nearby chains
- Chain 4
- 30S ribosomal protein S13
- Chain 5
- 30S ribosomal protein S14 type Z
- Chain I
- 30S ribosomal protein S19
- Chain h
- 50S ribosomal protein L31 type B
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