HL_7ASO_031

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

7ASO|1|Y|A|199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASO_031 not in the Motif Atlas

Geometric match to HL_4V9F_006

Geometric discrepancy: 0.1481

The information below is about HL_4V9F_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

7ASO|1|Y|G|197
7ASO|1|Y|A|198
7ASO|1|Y|A|199
7ASO|1|Y|A|200
7ASO|1|Y|C|201
7ASO|1|Y|A|202
7ASO|1|Y|U|203
7ASO|1|Y|C|204

Current chains

Chain Y

23S

Nearby chains

Chain O

50S ribosomal protein L15

Chain c

50S ribosomal protein L28