HL_7ASO_059

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

GUUGAUAUUC

Length

10 nucleotides

Bulged bases

7ASO|1|Y|U|1433, 7ASO|1|Y|U|1434

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASO_059 not in the Motif Atlas

Homologous match to HL_4WF9_035

Geometric discrepancy: 0.1738

The information below is about HL_4WF9_035

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7ASO|1|Y|G|1426
7ASO|1|Y|U|1427
7ASO|1|Y|U|1428
7ASO|1|Y|G|1429
7ASO|1|Y|A|1430
7ASO|1|Y|U|1431
7ASO|1|Y|A|1432
7ASO|1|Y|U|1433
7ASO|1|Y|U|1434
7ASO|1|Y|C|1435

Current chains

Chain Y

23S

Nearby chains

Chain W

50S ribosomal protein L23