HL_7ASO_060

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

CUAAGCAGUAAGGCUGAGUAAUCCGGUACUCGGGCUGAGCUGUGAUGG

Length

48 nucleotides

Bulged bases

7ASO|1|Y|G|1526, 7ASO|1|Y|C|1541, 7ASO|1|Y|C|1547

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASO|1|Y|C|1511
7ASO|1|Y|U|1512
7ASO|1|Y|A|1513
7ASO|1|Y|A|1514
7ASO|1|Y|G|1515
7ASO|1|Y|C|1516
7ASO|1|Y|A|1517
7ASO|1|Y|G|1518
7ASO|1|Y|U|1519
7ASO|1|Y|A|1520
7ASO|1|Y|A|1521
7ASO|1|Y|G|1522
7ASO|1|Y|G|1523
7ASO|1|Y|C|1524
7ASO|1|Y|U|1525
7ASO|1|Y|G|1526
7ASO|1|Y|A|1527
7ASO|1|Y|G|1528
7ASO|1|Y|U|1529
7ASO|1|Y|A|1530
7ASO|1|Y|A|1539
7ASO|1|Y|U|1540
7ASO|1|Y|C|1541
7ASO|1|Y|C|1542
7ASO|1|Y|G|1543
7ASO|1|Y|G|1544
7ASO|1|Y|U|1545
7ASO|1|Y|A|1546
7ASO|1|Y|C|1547
7ASO|1|Y|U|1548
7ASO|1|Y|C|1549
7ASO|1|Y|G|1550
7ASO|1|Y|G|1555
7ASO|1|Y|G|1556
7ASO|1|Y|C|1557
7ASO|1|Y|U|1558
7ASO|1|Y|G|1559
7ASO|1|Y|A|1560
7ASO|1|Y|G|1561
7ASO|1|Y|C|1562
7ASO|1|Y|U|1563
7ASO|1|Y|G|1564
7ASO|1|Y|U|1565
7ASO|1|Y|G|1566
7ASO|1|Y|A|1567
7ASO|1|Y|U|1568
7ASO|1|Y|G|1569
7ASO|1|Y|G|1570

Current chains

Chain Y

23S

Nearby chains